Package: mindthegap 2.0.0

mindthegap: Mind the Gap
Package to tidy UNAIDS estimates (from the EDMS database) as well as plot trends in UNAIDS 95 goals and ART coverage gap by country.
Authors:
mindthegap_2.0.0.tar.gz
mindthegap_2.0.0.zip(r-4.7)mindthegap_2.0.0.zip(r-4.6)mindthegap_2.0.0.zip(r-4.5)
mindthegap_2.0.0.tgz(r-4.6-any)mindthegap_2.0.0.tgz(r-4.5-any)
mindthegap_2.0.0.tar.gz(r-4.7-any)mindthegap_2.0.0.tar.gz(r-4.6-any)
mindthegap_2.0.0.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
mindthegap/json (API)
NEWS
| # Install 'mindthegap' in R: |
| install.packages('mindthegap', repos = c('https://usaid-oha-si.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/usaid-oha-si/mindthegap/issues
Pkgdown/docs site:https://usaid-oha-si.github.io
- expected_ind - Full list of expected indicators
- indicator_map - Mapping of EDMS Indicator Names to those used in OHA
- pepfar - PEPFAR countries + ISO codes
- req_cols - EMDS Extract Required Columns
Last updated from:f7fbc2d196. Checks:7 WARNING, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | WARNING | 204 | ||
| source / vignettes | OK | 283 | ||
| linux-release-x86_64 | WARNING | 170 | ||
| macos-release-arm64 | WARNING | 129 | ||
| macos-oldrel-arm64 | WARNING | 120 | ||
| windows-devel | WARNING | 161 | ||
| windows-release | WARNING | 113 | ||
| windows-oldrel | WARNING | 94 | ||
| wasm-release | OK | 164 |
Exports:%>%base_plotepi_plotgs_id_namesgs_id_unaidsload_unaidsmunge_edmsmunge_unaidsplot_connected_scatterplot_epi_trendsprep_epi_datapublish_releasepull_estimatespull_testtreatpull_unaidsregionssource_notetab_95s
Dependencies:askpassbase64encbigDbitbit64bitopsbslibcachemclicliprcommonmarkcpp11crayoncurldigestdplyrevaluatefarverfastmapfontawesomeforcatsfsgarglegenericsggplot2ggrepelggtextgitcredsgluegoogledrivegridtextgtgtablegtExtrashighrhmshtmltoolshtmlwidgetshttrhttr2iniisobandjpegjquerylibjsonlitejuicyjuiceknitrlabelinglifecyclelitedownlubridatemagrittrmarkdownmemoisemimeopensslpaletteerpiggybackpillarpkgconfigpngprettyunitsprismaticprogresspurrrR6rappdirsRColorBrewerRcppreactablereactRreadrrematch2rlangrmarkdownrstudioapiS7sassscalesstringistringrsystibbletidyrtidyselecttimechangetinytextzdbutf8uuidV8vctrsviridisLitevroomwithrxfunxml2yaml
95-95-95 Target Progress: Relative Base vs. PLHIV Base
Rendered fromrelative-plhiv-base.Rmdusingknitr::rmarkdownon Jun 12 2026.Last update: 2025-01-14
Started: 2022-01-27
Accessing Clean UNAIDS Data
Rendered fromaccessing-clean-unaids.Rmdusingknitr::rmarkdownon Jun 12 2026.Last update: 2025-01-14
Started: 2022-01-27
Epidemic Control Plots
Rendered fromepi_control_plots.Rmdusingknitr::rmarkdownon Jun 12 2026.Last update: 2025-01-14
Started: 2022-01-27
Extracting and Processing Data from EDMS
Rendered fromemds_pull.Rmdusingknitr::rmarkdownon Jun 12 2026.Last update: 2025-01-14
Started: 2025-01-14
Data Dictionary & Use Cases
Rendered fromunaids-data-dictionary.Rmdusingknitr::rmarkdownon Jun 12 2026.Last update: 2025-01-14
Started: 2022-01-27
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Add Annotation to a ggplot Object | adorn_annotation |
| 95's Table Plot | base_plot |
| Epidemic Control Plot | epi_plot |
| Full list of expected indicators | expected_ind |
| Mapping of EDMS Indicator Names to those used in OHA | indicator_map |
| Load tidy UNAIDS HIV Estimates and Test & Treat Data | load_unaids |
| Clean UNAIDS Data from EDMS | munge_edms |
| Cleaning UNAIDS Data | munge_unaids |
| PEPFAR countries + ISO codes | pepfar |
| Plot Epidemic Control Trajectories | plot_connected_scatter |
| Epidemic Control Plot | plot_epi_trends |
| Prepare UNAIDS Epidemiological Data for Analysis | prep_epi_data |
| Publish Tidy UNAIDS Data as a GitHub Release | publish_release |
| Pull clean UNAIDS HIV Estimates | pull_estimates |
| Pull clean UNAIDS HIV Test & Treat | pull_testtreat |
| Pull clean UNAIDS HIV Estimates and Test & Treat Data | pull_unaids |
| EMDS Extract Required Columns | req_cols |
| UNAIDS Source Info | source_note |
| 95's Table Plot | tab_95s |
