Package: mindthegap 2.0.0

mindthegap: Mind the Gap
Package to tidy UNAIDS estimates (from the EDMS database) as well as plot trends in UNAIDS 95 goals and ART coverage gap by country.
Authors:
mindthegap_2.0.0.tar.gz
mindthegap_2.0.0.zip(r-4.5)mindthegap_2.0.0.zip(r-4.4)mindthegap_2.0.0.zip(r-4.3)
mindthegap_2.0.0.tgz(r-4.5-any)mindthegap_2.0.0.tgz(r-4.4-any)mindthegap_2.0.0.tgz(r-4.3-any)
mindthegap_2.0.0.tar.gz(r-4.5-noble)mindthegap_2.0.0.tar.gz(r-4.4-noble)
mindthegap_2.0.0.tgz(r-4.4-emscripten)mindthegap_2.0.0.tgz(r-4.3-emscripten)
mindthegap.pdf |mindthegap.html✨
mindthegap/json (API)
NEWS
# Install 'mindthegap' in R: |
install.packages('mindthegap', repos = c('https://usaid-oha-si.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/usaid-oha-si/mindthegap/issues
Pkgdown site:https://usaid-oha-si.github.io
- expected_ind - Full list of expected indicators
- indicator_map - Mapping of EDMS Indicator Names to those used in OHA
- pepfar - PEPFAR countries + ISO codes
- req_cols - EMDS Extract Required Columns
Last updated 1 months agofrom:f7fbc2d196. Checks:1 OK, 7 WARNING. Indexed: yes.
Target | Result | Latest binary |
---|---|---|
Doc / Vignettes | OK | Feb 13 2025 |
R-4.5-win | WARNING | Feb 13 2025 |
R-4.5-mac | WARNING | Feb 13 2025 |
R-4.5-linux | WARNING | Feb 13 2025 |
R-4.4-win | WARNING | Feb 13 2025 |
R-4.4-mac | WARNING | Feb 13 2025 |
R-4.3-win | WARNING | Feb 13 2025 |
R-4.3-mac | WARNING | Feb 13 2025 |
Exports:%>%base_plotepi_plotgs_id_namesgs_id_unaidsload_unaidsmunge_edmsmunge_unaidsplot_connected_scatterplot_epi_trendsprep_epi_datapublish_releasepull_estimatespull_testtreatpull_unaidsregionssource_notetab_95s
Dependencies:askpassbase64encbigDbitbit64bitopsbslibcachemclicliprcolorspacecommonmarkcpp11crayoncurldigestdplyrevaluatefansifarverfastmapfontawesomeforcatsfsgarglegenericsggplot2ggrepelggtextghgitcredsgluegoogledrivegridtextgtgtablegtExtrashighrhmshtmltoolshtmlwidgetshttrhttr2iniisobandjpegjquerylibjsonlitejuicyjuiceknitrlabelinglatticelifecyclelubridatemagrittrmarkdownMASSMatrixmemoisemgcvmimemunsellnlmeopensslpaletteerpiggybackpillarpkgconfigpngprettyunitsprismaticprogresspurrrR6rappdirsRColorBrewerRcppreactablereactRreadrrematch2rlangrmarkdownrstudioapisassscalesstringistringrsystibbletidyrtidyselecttimechangetinytextzdbutf8uuidV8vctrsviridisLitevroomwithrxfunxml2yaml
95-95-95 Target Progress: Relative Base vs. PLHIV Base
Rendered fromrelative-plhiv-base.Rmd
usingknitr::rmarkdown
on Feb 13 2025.Last update: 2025-01-14
Started: 2022-01-27
Accessing Clean UNAIDS Data
Rendered fromaccessing-clean-unaids.Rmd
usingknitr::rmarkdown
on Feb 13 2025.Last update: 2025-01-14
Started: 2022-01-27
Epidemic Control Plots
Rendered fromepi_control_plots.Rmd
usingknitr::rmarkdown
on Feb 13 2025.Last update: 2025-01-14
Started: 2022-01-27
Extracting and Processing Data from EDMS
Rendered fromemds_pull.Rmd
usingknitr::rmarkdown
on Feb 13 2025.Last update: 2025-01-14
Started: 2025-01-14
Data Dictionary & Use Cases
Rendered fromunaids-data-dictionary.Rmd
usingknitr::rmarkdown
on Feb 13 2025.Last update: 2025-01-14
Started: 2022-01-27
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Add Annotation to a ggplot Object | adorn_annotation |
95's Table Plot | base_plot |
Epidemic Control Plot | epi_plot |
Full list of expected indicators | expected_ind |
Mapping of EDMS Indicator Names to those used in OHA | indicator_map |
Load tidy UNAIDS HIV Estimates and Test & Treat Data | load_unaids |
Clean UNAIDS Data from EDMS | munge_edms |
Cleaning UNAIDS Data | munge_unaids |
PEPFAR countries + ISO codes | pepfar |
Plot Epidemic Control Trajectories | plot_connected_scatter |
Epidemic Control Plot | plot_epi_trends |
Prepare UNAIDS Epidemiological Data for Analysis | prep_epi_data |
Publish Tidy UNAIDS Data as a GitHub Release | publish_release |
Pull clean UNAIDS HIV Estimates | pull_estimates |
Pull clean UNAIDS HIV Test & Treat | pull_testtreat |
Pull clean UNAIDS HIV Estimates and Test & Treat Data | pull_unaids |
EMDS Extract Required Columns | req_cols |
UNAIDS Source Info | source_note |
95's Table Plot | tab_95s |